Lecture 6: Hodgkin-Huxley model
Cell membrane = semi-permeable
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capacitor effect: \(\frac{d Q}{dt} = C_m \frac{V_m}{dt}\)
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ion channels: \(i_j = g_j (V - E_j)\)
- Charge conservation:
- \[c_m \frac{V_m}{dt} = \underbrace{-i_m}_{\text{leaky term}} + \frac{I_e}{A}\]
Integrate-and-Fire
LIF: Spiking mechanism:
\[V > V_{th} ⟹ V = V_r\]⟹ Adaptation: the firing rate $ν$ is logarithmic with respect to $I_e$
Saturation: With a refractory period $τ_{ref}$ ⟹ $ν$ is bounded by $1/τ_{ref}$
Experimentally: the inter-spike interval decreases after the first spikes and then becomes constant
Hodgkin-Huxley
At the beginning: a phenomenological model ⇒ they were trying to find a mathematical model to fit the data
⟹ Nobel prize: they developed also a whole bunch expermiental techniques to measure the voltage (at first: on a squid)
Channel dynamics
Membrane channels open/close stochastically
The current going through each channel is very low ⟶ order of magnitude: $\text{pA} = 10^{-12} \text{ A}$ VS input (external) current at the membrane: in $\text{nA}$
Hypothesis: Channels are independent with one another & Deterministic incoming current if you add up a lot of channels
Channels:
- are selective for different ions
- stick and ball model (activation gate ⟺ stick / inactivation gate ⟺ ball)
Potassium $K$ current
- $n$: activation variable: the fraction of open channels that are selective to $K$
NB: $α$ and $β$ are determined experimentally
It can be rewritten as:
\[\underbrace{\frac{1}{α_n + β_n}}_{≝ \, τ_n(V)}\frac{dn}{dt} = -n + \underbrace{\frac{α_n}{α_n + β_n}}_{≝ \, n_∞(V)}\]- Persistent current:
- \[I_K = \underbrace{\bar{g}_K}_{\text{effective conductance}} n^4(V, t)(V - E_K)\]
NB: $n^4$: to fit the data, better with $n^5$ but there wasn’t enough computing power when it was designed
“Persistent” current because:
\[I_K \propto n^4 \xrightarrow[t \to +∞]{} n_∞^4\]Sodium $N_a$ current
- $m$: activation (fast activation rate)
- $h$: inactivation (slow inactivation rate)
NB: so the activation gate must be active and the inactivation one inactive
Voltage clamp technique ⟹ change the command voltage (plateau-like function), and then measure the spikes
$K$ and $N_a$ counterbalance one another ⇒ interplay between $n_∞, m_∞$ and $h_∞$
The model
- Charge conservation:
- \[c_m \frac{V_m}{dt} = \underbrace{-i_m}_{\text{leaky term}} + \frac{I_e}{A}\]
Euler method:
\[\vec{X}_{i+1} = \vec{X}_i + Δt \cdot [f(\vec{X}_i)]\\ \vec{X} = \begin{pmatrix} V \\ n \\ m \\ h \\ \end{pmatrix}\]Application of Hodgkin-Huxley to Paramecium
Paramecium: one-cell protist ⟹ we can link the membrane current directly to its behavior (with Hodgkin-Huxley with calcium instead of sodium)
See Romain Brette’s work
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